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KNIME GmbH knime workflow
KNIME <t>workflow</t> for drug-likeness analysis (A) <t>and</t> <t>PMI</t> analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD
Knime Workflow, supplied by KNIME GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/knime+workflow/knime+workflow/pmc12276684-119-21-21
Average 90 stars, based on 1 article reviews
knime workflow - by Bioz Stars, 2026-10
90/100 stars

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1) Product Images from "Discovery of pyroptosis-inducing natural products in neuroblastomas: computational studies with experimental validation"

Article Title: Discovery of pyroptosis-inducing natural products in neuroblastomas: computational studies with experimental validation

Journal: BMC Complementary Medicine and Therapies

doi: 10.1186/s12906-025-05004-8

KNIME workflow for drug-likeness analysis (A) and PMI analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD
Figure Legend Snippet: KNIME workflow for drug-likeness analysis (A) and PMI analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD

Techniques Used: Selection

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Article Title: Techniques for targeted data extraction from unstructured sets of documents
Article Snippet: The KNIME workflow allows seamless integration of extracted data of the one or more regions or boxes as part of the pipeline, described herein, without further manual intervention.

Article Title: SCOPE: Revealing Hidden Mechanisms in Phenotypic Screens Through Target and Pathway Enrichment
Article Snippet: SCOPE is a computational pipeline that connects the pharmacologically diverse set of hits obtained in high-content screens (HCS) or high-throughput screens (HTS) to their biological targets and pathways providing hypothesis on mechanism of actions shared by hits. provides a graphical overview of different steps involved in the SCOPE pipeline which is implemented as a KNIME workflow (version 4.5.3).

Article Title: Application of Molecular Dynamic Simulation in the Enantiorecognition Mechanism of the Pharmaceutically Relevant Leu-Phe Dipeptides With Four Zwitterionic Chiral Stationary Phases.
Article Snippet: The KNIME workflow facilitated the calculation and statistical analysis of all the aforementioned descriptors.

Article Title: SCOPE: Revealing Hidden Mechanisms in Phenotypic Screens Through Target and Pathway Enrichment
Article Snippet: The KNIME workflow developed and used in this study will be made publicly available on the KNIME Community Hub upon acceptance of the manuscript.

Article Title: Application of Molecular Dynamic Simulation in the Enantiorecognition Mechanism of the Pharmaceutically Relevant Leu-Phe Dipeptides With Four Zwitterionic Chiral Stationary Phases.
Article Snippet: Following the conclusion of the dynamic run, the analyses of the three energies, as well as the type and number of interactions (π–cation-, H-bond, salt bridge, π–π stacking), were elaborated through a KNIME [31] workflow, providing a data matrix as output.

Selection:

Article Title: Discovery of pyroptosis-inducing natural products in neuroblastomas: computational studies with experimental validation
Article Snippet: .. Fig. 2 KNIME workflow for drug-likeness analysis (A) and PMI analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD The dataset was refined by pharmacophore screening to identify molecular property similarities between the dataset and reported ligands. ..



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KNIME GmbH knime workflow
KNIME <t>workflow</t> for drug-likeness analysis (A) <t>and</t> <t>PMI</t> analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD
Knime Workflow, supplied by KNIME GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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KNIME <t>workflow</t> for drug-likeness analysis (A) <t>and</t> <t>PMI</t> analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD
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KNIME <t>workflow</t> for drug-likeness analysis (A) <t>and</t> <t>PMI</t> analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD
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KNIME workflow for drug-likeness analysis (A) and PMI analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD

Journal: BMC Complementary Medicine and Therapies

Article Title: Discovery of pyroptosis-inducing natural products in neuroblastomas: computational studies with experimental validation

doi: 10.1186/s12906-025-05004-8

Figure Lengend Snippet: KNIME workflow for drug-likeness analysis (A) and PMI analysis (B). (C) Results of PMI analysis of natural compounds after drug-likeness selection. (D) Generation of the 3D pharmacophore hypothesis from the domain interface of NTD–CTD GSDMD

Article Snippet: Subsequent analysis focused on the molecular shape of the filtered compounds, employing the normalized principal moment of inertia (PMI) in a KNIME workflow (Fig. B, C).

Techniques: Selection